Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDGIAELTGARVEDLAGMDVFQGCPAEGLVSLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVHIPGVGERLLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGETLYRRFMSARVPSPAL----MHYLSEVDYVDHFVWVVTDGSDPVADARFVR-DETDPT-VAEIAFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNVPMRTIMDRYGAVWQR--EDVGVITTMIDVPGPGELSLGREMVDQINRVARQVIEAVG |
4U5Y Chain:A ((28-194)) | ---------------------------------------------------------------------------------------------------------------------------------------------------VVLRDGGTARVRPITVDDAERLVSFYEQVSDESKYYRFFA---PYPRLCAKDVHRFTHHDFVDRVGLAATIGGEFIATVRYDRI-----ADEAEVAFLVQDAHQGRGVASALLEHIAAVARERGIRRFAAEVLPANNKMIKVFMDAGYTQKRSFED-GVVRLEFDL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U5Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105772 for 1106 contacts (-95.6/contact) +
2D Compatibility (PS) -16280 + (NN) -7326 + (LL) 12096
1D Compatibility (HY) -6000 + (ID) 2900
Total energy: -126182.0 ( -114.09 by residue)
QMean score : 0.379
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