Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYETILVERD-QRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFTHR
3MOY Chain:A ((7-263))
-TYTTIATSRPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFTDR
General information:
TITO was launched using:
RESULT:
Template:
3MOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124717 for 2079 contacts (-60.0/contact) +
2D Compatibility (PS) -27759 + (NN) -11025 + (LL) 208
1D Compatibility (HY) -24000 + (ID) 7850
Total energy: -195143.0 ( -93.86 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3MOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MOY-query.scw
PDB file :
Tito_Scwrl_3MOY.pdb
: