Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGHWVRSFDRA-------PSLLPAHPQLEVLQGDITDADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAG-VQRFVYTSSNSVV-MGGQNIAGGDET-------LPYTDRFNDLYTETKVVAERFVL---AQNGVDGMLTCAIRPSGIWGNGDQTMFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHL-VPDGTAPGQAYFINDAEPINMFEFARPVLEAC---GQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
| 2P4H Chain:X ((6-276)) | --------------GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHTASPI----------EIVTKR---TVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGID--VVTLILPFIV----GRFVCPKLPDSIEKALVLVL-GKKE-QIGVTRFH-MVHVDDVARAHIYLLENSVPGGRY--------NCSPFIVPIEEMSQLLSAKYPEYQI------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128478 for 1814 contacts (-70.8/contact) +
2D Compatibility (PS) -24390 + (NN) -9247 + (LL) 9664
1D Compatibility (HY) -16800 + (ID) 4250
Total energy: -173501.0 ( -95.65 by residue)
QMean score : 0.410
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