Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTKDAVAVVTGGASGLGLATTKRLLDAGAQVVVVDLR---GDDVVGGLGDRARFAQADVTDEAAVSNALELAD-SLGPVRVVVNCAGTGNAIRV--LSRDGVFPLAAFRKIVDINLVGTFNVLRLGAERIAKTEP-IGEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASKLIRVVTIAPGLFDTPLLASLPAEAKASLGQQVPHPSRLGNPDEYGALVLHIIENPMLNGEVIRLDGAIRMAPR
2O23 Chain:A ((11-263))
---KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP----------NFLASQVPFPSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGAIRMQP-
General information:
TITO was launched using:
RESULT:
Template:
2O23.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146327 for 1984 contacts (-73.8/contact) +
2D Compatibility (PS) -25591 + (NN) -11137 + (LL) 1384
1D Compatibility (HY) -23200 + (ID) 7350
Total energy: -212221.0 ( -106.97 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_2O23.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O23-query.scw
PDB file :
Tito_Scwrl_2O23.pdb
: