Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVDHKRIPKQVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAATFEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLTARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQLLLERHDALPYDLAGRKLLVTAGGTREPIDPVRFIGNRSSGKQGYAVARVAAQRGADVTLIAGHTAGLVDPAGVEVVHVSSAQQLADAVSKHAPTADVLVMAAAVADFRPAQVATAKIKKGVEGPP-TIELLRNDDVLAGVVRARAHGQLPNMRAIVGFAAETGDANGDVLFHARAKLRRKGCDLLVVNAVGE-GRAFEVDSNDGWLLASDGTESALQHGSKTLMASRIVDAIVTFLAGCSS |
1U80 Chain:A ((5-218)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG-PVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKK-----ELTIKMVKNPDIVAGVAALKDHRPY-----VVGFAAET----NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFWQDG-DKVLPLERKELLGQLLLDEIVT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135591 for 1722 contacts (-78.7/contact) +
2D Compatibility (PS) -21971 + (NN) -9320 + (LL) 15268
1D Compatibility (HY) -16400 + (ID) 4450
Total energy: -172464.0 ( -100.15 by residue)
QMean score : 0.427
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