Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGL-SLKTLSGDLTTNPTAATG--------NVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS |
| 2BYO Chain:A ((28-206)) | --------------------------------------------IRQSLDATKGLTSVHVAVRTTGKVDSLLGITSADVDVRANPLAAKGVCTYNDEQGVPFRVQGDNISVKL--FD----------DWSNLGSISELS-TSRV-----GVTQLLSGVTNLQAQGTEVIDGISTTKITGTIPASSVKMLDP--GAKSARPATVWIAQDGSHHLVRASIDLGSG-SIQLTQSKWNEPVNV------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29436 for 1161 contacts (-25.4/contact) +
2D Compatibility (PS) -17326 + (NN) -3527 + (LL) 2860
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -62379.0 ( -53.73 by residue)
QMean score : 0.276
|
|
|