Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVVPGAPSRPASAVSRPSYRQCVQASAQTSARRYSFPSYRRPPAEKLVFPVLLGILTLLLSACQTASASGYNEPRGYDRATLKLVFSMDLGMCLNRFTYDSKLAPSRPQVVACDSREARIRNDGFHANAPSCMRIDYELITQNHRAYYCLKYLVRVGYCYPAVTTPGKPPSVLLYAPSACDESLPSPRVATAL-----VPGTRSANREFSRFVVTEIKSLGAGGRCDSASVSLQPPEEIEGPAIPPASSQLVCVAPK |
4I3R Chain:L ((38-119)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------PGQPPKLLIFATSKRASGIPDRFSGSQFGKQYTLTITRMEPEDFARYYCQQLEFFGQGTRLEIRRTVAAPSVFI----FPPSDEQL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I3R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14994 for 330 contacts (-45.4/contact) +
2D Compatibility (PS) -8280 + (NN) -6455 + (LL) 11104
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -24875.0 ( -75.38 by residue)
QMean score : 0.218
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