Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTILEIKDLHVSVENPAEADHEIPILRGVDLTVKSGETHALMGPNGSGKSTLSYAIAGHPKYHVTSGTITLDGADVLAMSIDERARAGLFLAMQYPVEVPGVSMSNFLRSAATAI---RGEPPKLRHWVKEV-KAAMAALDIDPAFAERSVNEGFSGGEKKRHEILQLELLKPKIAILDETDSGLDVDALRVVSEGVNRYAESQHGGILLITHYTRILRYIHPEYVHVFVGGRIVESGGSELADELDQNGYVRFSPASGRYPHQPAPTGA |
2ZU0 Chain:C ((20-260)) | --MLSIKDLHVSVEDKA-------ILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGKR-SFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGY------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134507 for 1886 contacts (-71.3/contact) +
2D Compatibility (PS) -25768 + (NN) -9295 + (LL) 776
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -203094.0 ( -107.69 by residue)
QMean score : 0.612
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