Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEFDDIKNLSLPETRDAAKQLLDSVAGDLTGEAAQRFQALTRHAEELRAEQRRRGREAEEALRRYRAGELRVVPGAPTGGDDGDAPPGNSLRDTAFRTLDSCVRDGLMSSRAAETAETLCRTGPPQSTSWAQRWLAATGSRDYLGAFVKRVSNPVAGHTVWTDREAAAWREAAAVAAEQRAMGLVDTQGGFLIPAALDPAILLSGDGSTNPIRQVARVVQTTSEIWRGVTSEGAEARWYSEAQEVSDDSPALAQPAVPNYRGSCWIPFSIELEGDAASFVGEIG-KILADSVEQLQAAAFVNGSGNGEPTGFVSALTGTSDQVVVGAGSEAIVAADVYALQSALPPRFQASAAFAANLSTINTLRQAETSNGALKFPSLHDSPPMLAGKSVLEVSHMDTVDSAVTATNHPLVLGDWKQFLIGDRVGSMVELVPHLFGPNRRPTGQRGFFAWFRVGSDVLVRNAFRVLKVETTA |
4CLQ Chain:A ((210-307)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGAKKVLKNLQCEVNITADVWRG---------------ENSGKSPGWGITLVAQSKQKGWSYFAEDI-GDAGSIPEELGEKVACQLLEEISKSAAV--GRNQLPLAIVYMVIGKED-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2954 for 522 contacts (5.7/contact) +
2D Compatibility (PS) -9674 + (NN) 2827 + (LL) 23908
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: 14665.0 ( 28.09 by residue)
QMean score : -0.104
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