Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTIDPDQIRAEIDALLASLPDPADAENGPSLAELE----GIARRLSEAHEVLLAALESAEKG
4ZQB Chain:B ((45-83))
--------RAEVDIAIVANPDPADLAELPNLVWIHSLWAGVERLVAE---------------
General information:
TITO was launched using:
RESULT:
Template:
4ZQB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2797 for 163 contacts (17.2/contact) +
2D Compatibility (PS) -3605 + (NN) -321 + (LL) 2012
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -1417.0 ( -8.69 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_4ZQB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZQB-query.scw
PDB file :
Tito_Scwrl_4ZQB.pdb
: