Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGDQSDHVLQHWTVDISIDEHEGLTRAKARLRWREKELVGVGLARLNPADRNVPEIGDELSVARALSDLGKRMLKVSTHDIEAVTHQPARLLY
5CNQ Chain:A ((204-288))
-----------------------------------------------------IPGCGIKVACQAAKAGFGKELC--------AITEWKQRLLH
General information:
TITO was launched using:
RESULT:
Template:
5CNQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -792 for 133 contacts (-6.0/contact) +
2D Compatibility (PS) -3532 + (NN) -970 + (LL) 4136
1D Compatibility (HY) -3200 + (ID) 500
Total energy: -4858.0 ( -36.53 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_5CNQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CNQ-query.scw
PDB file :
Tito_Scwrl_5CNQ.pdb
: