Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRLDPSRCVGHAQCYAVDPDLFPIDDSGNSILAEHEVRPEDM-QLTRDGVAACPEMALILEEDDAD
1SJ1 Chain:A ((2-65))
WKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEE----
General information:
TITO was launched using:
RESULT:
Template:
1SJ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34068 for 432 contacts (-78.9/contact) +
2D Compatibility (PS) -6512 + (NN) -2581 + (LL) -84
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -48995.0 ( -113.41 by residue)
QMean score : 0.493
(partial model without unconserved sides chains):
PDB file :
Tito_1SJ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SJ1-query.scw
PDB file :
Tito_Scwrl_1SJ1.pdb
: