Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQQSTRTDITVNVDGFWMLQALLDIRHVAPELRCRPYVSTDSNDWLNEHPGMAVMREQGIVV-NDAVNEQVAARMKVLAAPDLEVVALLSRGKLLYGVIDDENQPPGSRDIPDNEFRVVLARRGQHWVSAVRVGNDITVDDVTVS---DSASIAALVMDGLESIHHADPAAINAVNVPMEEMLEATKSWQESGFNVFSGGDLRRMGISAATVAALGQALSDPAAEVAVYARQYRDDA-KGPSASVLSLKDGSGGRIALYQQARTAGSGEAWLAICPATPQLVQVGVKTVLDTLPYGEWKTHSRV |
| 4L4W Chain:A ((2-265)) | -----GPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFV------------------------LLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVP--V-L---TAGLSGRKPARFDDFALPAAAGARADEQIRN---GAPLAEVLEFLGVPPSARPLVESVFDGRR-TYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHP--TKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65580 for 1861 contacts (-35.2/contact) +
2D Compatibility (PS) -25113 + (NN) -437 + (LL) 1476
1D Compatibility (HY) 6800 + (ID) 1200
Total energy: -84054.0 ( -45.17 by residue)
QMean score : 0.203
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