Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMRFLDGHPPGYDLTYNDVFIVPNRSEVASRFDVDLST--ADGSGTTIPVVVANMTAVAGRRMAETVARRGGIVILPQDLPIPAVKQTVAFVK-SRDLVLDTPVTLAPDDSVSDAMALIHKRAHGVAVVILEGRPIGLVRESSCLGVDRFTRVRDIAVTDYVTAPAGTEPRKIFDLLEHAPVDVAVLTDADGTLAGVLSRTGAIRAGIYTPAT-DSAGRLRIGAAVGINGDVGAKARALAEAGVDVLVIDTAHGHQVKTLDAIKAVSALDLGLPLAAGNVVSAEGTRDLLKAGANVVKVGVGPGAMCTTRMMTGVGRPQFSAVLECASAARQLGGHIWADGGIRHPRDVALALAAGASNVMIGSWFAGTYESPGDLMRDRDDQPYKESYGMASKRAVVARTGADNPFD--RARKALFEEGISTSRMGLDPDRGGVEDLIDHITSGVRSTCTYVGASNLAELHERAVVGVQSGAGFAEGHPLPAGW |
| 2CU0 Chain:A ((8-469)) | ----LEKAIKGY--TFDDVLLIPQATEVEPK-DVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAE---------------------------------------------------------------------------------------------------------------KYKNAVRDENGELLVAAAVS-PFDI-KRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQ-KVDADFIVGNIANPKAVDDLTFADA--VKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRYSGDIVKAIAAGADAVMLGNLLAGTKEAPGKEVI-INGRKYKQYRGMGSLGAMM-K--------YMKTRK-FVPEGVE----GVVPYRGTVSEVLYQLVGGLKAGMGYVGARNIRELKEKGEFVIITHAGIKESHP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184341 for 3034 contacts (-60.8/contact) +
2D Compatibility (PS) -36344 + (NN) -10797 + (LL) 9148
1D Compatibility (HY) -29200 + (ID) 6500
Total energy: -258034.0 ( -85.05 by residue)
QMean score : 0.482
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