Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTRPREIYLATAVSIGILLSLIAPLGPPLARADGTSQLAELVDAAAERLEVADPVAAFKWRAQLPIEDSGRVEQQLAKLGEDARSQHIDPDYVTRVFDDQIRATEAIEYSRFSDWKLNPASA-PPEPPDLSASRSAIDSLNNRMLSQIWSHWSLLSAPSCAAQLDRAKRDIVRSRHLDSLYQRALTTATQSYCQALPPA |
2GBB Chain:A ((4-111)) | ------------------------------------GQTAPLIN---ERLSYMKDVAGYKAENHLPIEDRIQEEKVINSAMAQAESLGLNGESIKPLMVAQINAAKAIQYRYRADWLSQPEPGWQPKP--LDDVRANIGELSTKILEQI--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2734 for 697 contacts (-3.9/contact) +
2D Compatibility (PS) -11698 + (NN) -7886 + (LL) 6660
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -23808.0 ( -34.16 by residue)
QMean score : 0.519
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