Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRRAGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
2QPX Chain:A ((106-125))
------------------------PDDPILDLDQTAELVGIPVKAI----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QPX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4061 for 79 contacts (-51.4/contact) +
2D Compatibility (PS) -2297 + (NN) -3155 + (LL) 7560
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -4503.0 ( -57.00 by residue)
QMean score : 0.781
(partial model without unconserved sides chains):
PDB file :
Tito_2QPX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QPX-query.scw
PDB file :
Tito_Scwrl_2QPX.pdb
: