Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEQTIYGANTPGGSGPRTKIRTHHLQRWKADGHKWAMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMVPAELATQITGKLTIPTVGIGAGPNCDGQVLVWQDMAGFSGAKTARFVKRYADVGGELRRAAMQYAQEVAGGVFPADEHSF
1O68 Chain:A ((4-263))
--------------------ITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAE-LMAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFA-----------KAQALLNDAKAHDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLGIFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIF
General information:
TITO was launched using:
RESULT:
Template:
1O68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -214707 for 2293 contacts (-93.6/contact) +
2D Compatibility (PS) -27452 + (NN) -12509 + (LL) 276
1D Compatibility (HY) -21200 + (ID) 5950
Total energy: -281542.0 ( -122.78 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1O68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O68-query.scw
PDB file :
Tito_Scwrl_1O68.pdb
: