Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAW-SKAADLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAGKDVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLEQLDLV-PANRNAAGQIVAAG---RLTALEKLAEDPPAKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPARAVKSPADLDELANL |
| 2H1Y Chain:A ((3-300)) | -YALLFPGQGSQCIGMGKSFYEGHTLAKELFERASNALKVDMKK-TLFEENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQRTKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAK-RVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKAKAVELLSLQLTQPVRYQDCVKS-NNDRVDIFFELGCGSVLKGLNKR-LSNKPTISVGDNKGLDE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147340 for 2628 contacts (-56.1/contact) +
2D Compatibility (PS) -31862 + (NN) -18703 + (LL) 1224
1D Compatibility (HY) -18400 + (ID) 4700
Total energy: -219781.0 ( -83.63 by residue)
QMean score : 0.442
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