Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYVAAEPGVLISPTDDLQSPRSAPAAHDENADGITGGTRDDSAPNSRFQLGRRIPEATAQEGFLVRPFTQQCQIIHTEGDHAVIGVSPGNSYFSRQRLRDLGLWGLTNFDRVDFVYTDVHVAESYEALGDSAIEARRKAVKNIRGVR--AKITTTVNELDPAGARLCVRPMSEFQSNEAYRELHADLLTRLKDDEDLRAVCQDLVR-RFLSTKVGPRQG--ATATQEQVCMDYICAEAPLFLDTPAILGVPSSLNCYHQSLPLAEMLYARGSGLRASRNQGHAIVTPDGSPAE |
| 3OQJ Chain:A ((13-233)) | ---------------------------------------------------------------FKTETLTQNCNEILKRRRHVLVGISPFNSRFSEDYIHRLIAWAVREFQSVSVLLAGKEAANLLEALGTPHGKAERKVRKEVSRNRRFAEKALEAHGGNPED----IHTFSDFANQTAYRNLRMEVEAAFFDQTHFRNACLEMSHAAILG--------VEVSADMLELAVEYVIAELPFFIAAPDILGVEETLLAYHRPWKLGEQISRNEFAVKMRPNQGYLMVS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97404 for 1690 contacts (-57.6/contact) +
2D Compatibility (PS) -22714 + (NN) -14742 + (LL) 2336
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -147874.0 ( -87.50 by residue)
QMean score : 0.361
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