Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVAMLFYVDTLPDTGAVAVVDGDEGFHAATVRRIRPGEQLVLGDGVGRLARCVVEQAGRGGLRARVLRRWSVPPVRPP-VTVVQALPKSERSELAIELATEAGADAFLAWQAARCVANWDGARVDKGLRRWRAVVRSAARQSRRARIPPVDGVLSTPMLVQRVREEVAAGAAVLVLHEEATERIVDIAAAQAGSLMLVVGPEGGIAPDELAALTDAGAVAVRLGPTVLRTSTAAAVALGAVGVLTSRWDASASDCEYCDVTRR |
1Z85 Chain:A ((34-229)) | --------------------------HHMRVVRLKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTEKLSVVVPIGRWERTRFLIEKCVELGVDEIFFHKFER-------SQHEISLDKAKIVVREAAKQCKRYLFPKVSFL-----------EKLEFSGNVITLDL---QNLLD--ANLEGSITVVVGPEGGFSEKERELLRSSTTI-V------LRFETAAILTVGYIAL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z85.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89818 for 1320 contacts (-68.0/contact) +
2D Compatibility (PS) -19759 + (NN) -2880 + (LL) 5344
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -120113.0 ( -90.99 by residue)
QMean score : 0.377
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