Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPH-----GGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL
4IJ5 Chain:A ((3-180))
----KLILVRHAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHLDVIYSSPLKRTYLTALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVEE----PHKVEFQGGESLASVYNRVKGFLEEV--RKRHW------NQTVVVVSHTVPMRAMYCALLGVDLSKFWSFGC-DNASYS---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47748 for 1410 contacts (-33.9/contact) +
2D Compatibility (PS) -19028 + (NN) -10413 + (LL) 3248
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -88841.0 ( -63.01 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_4IJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IJ5-query.scw
PDB file :
Tito_Scwrl_4IJ5.pdb
: