Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIVGVGIDLVSIPDFAEQVDQPGTVFAETFTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIHRDIEVVTDMWGRPRVRLTGAIAEYLADVTIHVSLTHEGDTAAAVAILEAP
3GWM Chain:A ((1-129))
-AIVGVGIDLVSIPDFAEQVDRPGTVFAETFTPGERRDAADKSSSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHRDIEVVTDMWGRPKVRLSGEIAKHLEDVTIHVSLTHEDQTAAAVAIIEEP
General information:
TITO was launched using:
RESULT:
Template:
3GWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61439 for 986 contacts (-62.3/contact) +
2D Compatibility (PS) -14415 + (NN) -7353 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5550
Total energy: -102149.0 ( -103.60 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3GWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWM-query.scw
PDB file :
Tito_Scwrl_3GWM.pdb
: