Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDIGAPVTVQVAVDPPYPVVIGTGL-LDELEDLLADRHKVAVVHQPGLAETAEEIRKRLAG--KGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDA-LVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRERYR-WRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPD-ALPQLLEIMAGDKKTRAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVCAP |
| 5HVN Chain:A ((6-341)) | -----SKLSVNPTFSPSYNIIVDSVLDFSHILEYVTNK-QVLVVTNTTVAKLY--LTKFLAALVDDLDVRTCILEDGEQYKSQQSLDKILSTLLENHFTRNSTVLVALGGGVIGDITGFAAAIYQRGIDFIQIPTTLLSQVDSSVGGKTAINHQLGKNMIGAFYQPKVVYTSIEFYKTLPQREYIAGMAEVVKYAFISKDFYL-WLDSNRDKILAKDSVTLIEMVKRSCQIKAQVVAMD---TGARAILNFGHTFGHAIEKCQNYRGLKHGEAVGVGMAQAIDFSHYLGLISQQQAKDFNDFIVSFGISIDFPNDICQKEFLEAMLLD----NKELKFILIENI------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 5HVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226664 for 2681 contacts (-84.5/contact) +
2D Compatibility (PS) -34717 + (NN) -7889 + (LL) 1696
1D Compatibility (HY) -31600 + (ID) 5600
Total energy: -304774.0 ( -113.68 by residue)
QMean score : 0.521
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