Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDADLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATSPLATEA
3GE9 Chain:A ((3-245))
--EQVKLSVELIACSSFTPPADVEWSTDVEGAEALVEFAGRACY----------ASNAAYLRHIMEVGHTALLEHANATMYIRGISRSATHELVRHRHFSFSQLS--------SEVVVPTLIDEDPQLRELFMHAMDESRFAFNELLNALEEK---------RKKQARQAARAVLPNATESRIVVSGNFRTWRHFIGMRASEHADVEIREVAVECLRKLQVAAPTVFGDFEIETLADGSQMATSP-----
General information:
TITO was launched using:
RESULT:
Template:
3GE9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137540 for 1587 contacts (-86.7/contact) +
2D Compatibility (PS) -23983 + (NN) -9325 + (LL) 2092
1D Compatibility (HY) -22800 + (ID) 7050
Total energy: -198606.0 ( -125.15 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_3GE9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE9-query.scw
PDB file :
Tito_Scwrl_3GE9.pdb
: