Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTARPLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
4WRV Chain:A ((16-238))
----PLSELVERGWAAALEPVADQVAHMGQFLRAEIAAGRRYLPAGSNVLRAFTFPFDNVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPWPRSLANIFDEYTADLGYPLPSNGDLTPWAQRGVLLLNRVLTVRPSNPASHRGKGWEAVTECAIRALAARAAPLVAILWGRDASTLKPMLAAGNCVAIESPHPSPLSASRGFFGSRPFSRANELLVGMGAEPIDWRLP
General information:
TITO was launched using:
RESULT:
Template:
4WRV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144953 for 1828 contacts (-79.3/contact) +
2D Compatibility (PS) -24305 + (NN) -17540 + (LL) 504
1D Compatibility (HY) -29200 + (ID) 11150
Total energy: -226644.0 ( -123.98 by residue)
QMean score : 0.638
(partial model without unconserved sides chains):
PDB file :
Tito_4WRV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WRV-query.scw
PDB file :
Tito_Scwrl_4WRV.pdb
: