Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEVLVLVEHAEGALKKVSAELITAARALGEP-----AAVVVGVPGTAAPLVDGLKAAGAAKIYVAESDLVDKYLITPAVDVLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVD--VVDVREGGV--GVHSIFGGAFTVEAQANGDTPVI-TVRAGAVEA-EP-AAGAGEQVSVEVPAAAENAARITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGYYPGQFQVGQTGKTVSPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAIKARKG |
| 4KPU Chain:A ((14-338)) | --DLWVYVEHYKGEPVHVVYELLGECRKLADKCNQKLAAVLITDDAKDVP--SKLIARGADLVYVCQDPAFKYYSTDEYTNAFCEMIDEYQPSSVFIGATNDGRDLGPRIAARVNTGLCADCTILDAEEDGLIEWTRPAAGGNIMATILCKEHRPQMGTVRPKTFKAMEPDASRTGEVINYTLKNHVDDRVTCIRREEVVSEGEMAIDDAPFVCSGGRGMKAKENFSLLYDLAHALGGAVGGSRAAVDEGFIEHPRQVGQSGKTVTPKIYFACGISGSVQHKAGMSKSDTIVCINKDPDAPMFEISKYGIVGDALKILPLLTAKIKAFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215758 for 2591 contacts (-83.3/contact) +
2D Compatibility (PS) -34453 + (NN) -13096 + (LL) 548
1D Compatibility (HY) -24000 + (ID) 6100
Total energy: -292859.0 ( -113.03 by residue)
QMean score : 0.576
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