Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQHFDVLIIGAGLSGIGTACHVTAEFPDKTIALLERRERLGGTWDLFRYPGVRSDSDMFTFGY-----KFRPWRDVKVLADGASIRQYIADTATEFGVDEKIHYGLKVNTAEWSSRQCRWTVAGVHEATGETRTYTCDYLISCTGYYNYDAGYLPDFPGVHRFGGRCVHPQHWPED-------LDYSGKKVVVIGSGATAVTLVPAMAGSNPGSAAHVTMLQRSPSYIFSL---PAVDKISEVLGRFLPDRWVYEFGRRRNIAI----------------QRKLYQACRRWP-------------------KLMRRLLLWEVRRRLGRSVDMSNFTPNYLPWDERLCAVPNGDLFKTLASGAASVVTDQ---IETFTEKGILCKSGREIEADIIVTATG-------LNIQMLGGMRLIVDGAEYQLPEKMTYKGVLLENAPNLAWIIGYTNASWTLKSDIAGA----YLCRLLRHMADNGYTVATPRDAQDCALDVGMFDQLNSGYVKRGQDIMPRQGSKHPWRVLMHYEKDAKILLEDPIDDGVLHFAAAAQDHAAA |
3UP5 Chain:A ((10-479)) | ----LDAVVIGAGVTGIYQAFLINQA--GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-----EVVTCRFLISATG--PLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAA----ETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPT--ILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPFGAKRVPMET-NYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDGSLDRIDIRGKDNVRLIDAWAE----GPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMKDNGFTYSEPTQAAE------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257481 for 3213 contacts (-80.1/contact) +
2D Compatibility (PS) -43022 + (NN) -11600 + (LL) 5072
1D Compatibility (HY) -28800 + (ID) 5700
Total energy: -341531.0 ( -106.30 by residue)
QMean score : 0.401
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