Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSWPAAAVDRVIKAYDVRGLVGEEIDESLVTDLGAAFARLMRTEDARPVVIGHDMRDSSPSLADAFAAGVTGQGLDVVRVGLASTDQLYFASGLLDCP-GAMFTASHNPAAYNGIKMCRAAAKPVGADTGLTAIRD-----DLIAGVARYDGTPGTIADQDVLVDYGAFLRSLVDTSGLRPLRVAVDAGNGMAGHTAPAVLGVIDSITLLPSYFELDGSFPNHEANPLDPANLVDLQAYVRDTGADIGLAFDGDADRCFVVDERGQPVSPSTVTALVAARELNREIGATIIHNVITSRAVPELVAERGGTPLRSRVGHSYIKALMAETGAIFGGEHSAHYYFRDFW-GADSGMLAALHVLAALGEQSRPLSELTADYQRYESSGEINFTVVDSS--ACVEAVLKSFGNRIVSIDHLDGVTVDLGDDSWFNLRSSNTEPLLRLNVEGRSVGDVDAVVRQVSAEIAAQSAHAKAGP |
| 2H5A Chain:X ((13-434)) | ----------IFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKI--VVAGETLANEQIQALRERIEKNDLASGV-------GSVEQVDILPRYFKQIRD--DIAMAKPMKVVVDCGNGVAGVIAPQLIEAL-GCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGNITTLDGVRVDY-PKGWGLVRASNTTPVLVLRFE----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212834 for 3814 contacts (-55.8/contact) +
2D Compatibility (PS) -44107 + (NN) -22349 + (LL) 3052
1D Compatibility (HY) -29200 + (ID) 7800
Total energy: -313238.0 ( -82.13 by residue)
QMean score : 0.474
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