Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVFRRTVGAQWPILLVGSIFAVGFVLAGANFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
4B19 Chain:A ((6-24))
------------------HIIAPVISGCAIAFFSYWL------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4B19.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5665 for 74 contacts (-76.6/contact) +
2D Compatibility (PS) -1868 + (NN) 207 + (LL) 7064
1D Compatibility (HY) -800 + (ID) 150
Total energy: -1212.0 ( -16.38 by residue)
QMean score : -0.225
(partial model without unconserved sides chains):
PDB file :
Tito_4B19.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B19-query.scw
PDB file :
Tito_Scwrl_4B19.pdb
: