Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MREFGNPLGDRPPLDELARTDLLLDALAEREEVDFADPRDDALAALLGQWRDDLRWPPASALVSQDEAVAALRAGVAQRRRARRSLAAVGSVAAALLVLSGFGAVVADARPGDLLYGLHAMMFNRSRVSDDQIVLSAKANLAKVEQMIAQGQWAEAQDELAEVSSTVQAVTDGSRRQDLINEVNLLNTKVETRDPNATLRPGSPSNPAAPGSVGNSWTPLAPVVEPPTPPTPASAAEPSMSAGVSESPMPNSTSTVAASPSTPSSKPEPGSIDPSLEPADEATNPAGQPAPETPVSPTH |
| 1YQ2 Chain:A ((678-757)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAMPAAP--LGETWLTVEAVLRDATGWAPAGHPLGAVQLDLSAPAVP----TRSPRPATPLDGALPVSLGPATFDAGTLVSLAGQP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14750 for 322 contacts (45.8/contact) +
2D Compatibility (PS) -8789 + (NN) -17507 + (LL) 14488
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -1108.0 ( -3.44 by residue)
QMean score : 0.461
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