Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEAPDVDLADGNFYASREARAAYRWMRANQPVFRDRNGLAAASTYQAVIDAERQPELFSNAGGIRPD--QPALP----MMIDMDDPAHLLRRKLVNAGFTRKRVKDKEASIAALCDTLIDAVCERG---ECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFLSSHVSQEDFQITMDAFAAYNDFTRATIAARRADPTDDLVSVLVSSEVDGERLSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRD-PSLLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPNSHLAF-GFGTHFCLGNQLARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSPPLG
2WM4 Chain:A ((40-435))---ALDDDVRDGAFATLRREAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPDIFSSYPNITINDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFHWTNVILGFGDPDLAT-DFDEFMQVSADIGAYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFDGLAPTAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEPARL---LSQFIHGIKTLPVTWS------


General information:
TITO was launched using:
RESULT:

Template: 2WM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157319 for 3191 contacts (-49.3/contact) +
2D Compatibility (PS) -41282 + (NN) -18661 + (LL) 160
1D Compatibility (HY) -21200 + (ID) 7050
Total energy: -245352.0 ( -76.89 by residue)
QMean score : 0.437

(partial model without unconserved sides chains):
PDB file : Tito_2WM4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WM4-query.scw
PDB file : Tito_Scwrl_2WM4.pdb: