Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGHRAM--IVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
1VPA Chain:A ((15-228))--------VAILLAAGKGERMSENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWFEVVEKRVFHEKVLGIVEGGDTRSQSVRSALEFLEKFS-PSYVLVHDSARPFLRKKHVSEVLRRARETGAATL-ALKNSDALVRVE-NDRIEYIP-RKGVYRILTPQAFSYEILKKAHENG------GEWADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELARIIAR-


General information:
TITO was launched using:
RESULT:

Template: 1VPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -163316 for 1727 contacts (-94.6/contact) +
2D Compatibility (PS) -23805 + (NN) -14640 + (LL) 1164
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -218897.0 ( -126.75 by residue)
QMean score : 0.429

(partial model without unconserved sides chains):
PDB file : Tito_1VPA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VPA-query.scw
PDB file : Tito_Scwrl_1VPA.pdb: