Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVARHRAQAAADLASLAAAARLPSGLAAACARATLVARAMRVEHAQCRVVDLDVVVTVEVAVAFAGVATATARAGPAKVPTTPG
2IFR Chain:A ((187-203))
---------------------------------------NNQDVTDCSVSGTTVSC----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IFR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4762 for 48 contacts (-99.2/contact) +
2D Compatibility (PS) -1683 + (NN) 1317 + (LL) 6084
1D Compatibility (HY) 400 + (ID) 150
Total energy: 1206.0 ( 25.12 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_2IFR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IFR-query.scw
PDB file :
Tito_Scwrl_2IFR.pdb
: