Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAEAELKVAREGKLLSPTRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFSGHGARLSARVGGAE---RSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMPAKRRRTAHSAISSQLDGIEADLMARLGLT |
5F2Z Chain:A ((44-104)) | ------------------------------------------------------------------------------------------------------------------------------------------------GGPEQLRRNLARVVGKPPADVPD----DLIRASLASYARYWREAFRLPA----MDHGRLGEQLDVIDID-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5F2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1209 for 238 contacts (5.1/contact) +
2D Compatibility (PS) -6246 + (NN) -4098 + (LL) 14696
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: 561.0 ( 2.36 by residue)
QMean score : 0.334
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