Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
4J42 Chain:A ((8-87))
----KITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQFIPILEGISTDLKRIADKFR----------------
General information:
TITO was launched using:
RESULT:
Template:
4J42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -414 for 365 contacts (-1.1/contact) +
2D Compatibility (PS) -8674 + (NN) -1583 + (LL) 1952
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -13019.0 ( -35.67 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_4J42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4J42-query.scw
PDB file :
Tito_Scwrl_4J42.pdb
: