Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQSQTVTVDQQEILNRANEVEAPMADPPTDVPITPCELTAAKNAAQQLVLSADNMREYLAAGAKERQRLATSLRNAAKAYGEVDEEAATALDNDGEGT---VQAESAGAVGGDSSAELTDTPRVATAGEPNFMDLKEAARKLETGD-QGASLAHFADGWNTFNLTLQGDVKRFRG-FDNWEGDAATACEASLDQQRQWILHMAKLSAAMAKQAQYVAQLHVWARREHPTYEDIVGLERLYAENPSARDQILPVYAEYQQRSEKVLTEYNNKAALEPVNPPKPPPAIKIDPPPPPQEQGLIPGFLMPPSDGSGVTPGTGMPAAPMVPPTGSPGGGLPADTAAQLTSAGREAAALSGDVAVKAASLGGGGGGGVPSAPLGSAIGGAESVRPAGAGDIAGLGQGRAGGGAALGGGGMGMPMGAAHQGQGGAKSKGSQQEDEALYTEDRAWTEAVIGNRRRQDSKESK |
| 4WJ2 Chain:A ((12-281)) | -------------LERKAHECESTRPEGPGDA-TKPDELATTASVYSKLMASAAKLKATFAAGDREGERIAAAIRAAAGAYQKIEEQKAAELS------AEAVVPDMSG-IPGPLAIPSMEYPSA-----E--MDWEAAARIIHSGDTQALSMKYFRDQWRDYQSTLEGHGRHFANPAEGWAGAAAETCAEAQRRLSTWWADMGAECGRLAQEATTFVDAHDKLVANHPTLENVREFEETEWASEWDRQN---AWAMLQEQSEDALEAYANGSQIQEIRPGKPP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31991 for 1826 contacts (-17.5/contact) +
2D Compatibility (PS) -27454 + (NN) -17296 + (LL) 3940
1D Compatibility (HY) -6000 + (ID) 3600
Total energy: -82401.0 ( -45.13 by residue)
QMean score : 0.476
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