Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKCRIRISHPLFGELMAQTRDLSDTGVYVKHPDLTQLPTGSVVTGQVQDLPID--APILQMEVVRVDA--EGVGLRFLSEA
3CNR Chain:A ((9-90))
-----------GILSLALKDKP-ALYSAYMPFVKGGGIFVPTPK--RYMLGDEVFLLLT-LPDSSERLPVAGKVIWTTPAAAGIGVQFPDGP
General information:
TITO was launched using:
RESULT:
Template:
3CNR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16987 for 444 contacts (-38.3/contact) +
2D Compatibility (PS) -7488 + (NN) 459 + (LL) 640
1D Compatibility (HY) -400 + (ID) 350
Total energy: -24126.0 ( -54.34 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_3CNR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CNR-query.scw
PDB file :
Tito_Scwrl_3CNR.pdb
: