Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
4AL2 Chain:A ((1-162))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLD----
General information:
TITO was launched using:
RESULT:
Template:
4AL2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77149 for 1243 contacts (-62.1/contact) +
2D Compatibility (PS) -17142 + (NN) -5789 + (LL) 812
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -122668.0 ( -98.69 by residue)
QMean score : 0.736
(partial model without unconserved sides chains):
PDB file :
Tito_4AL2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AL2-query.scw
PDB file :
Tito_Scwrl_4AL2.pdb
: