Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLP-EWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSAN-PAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
1K7J Chain:A ((20-188))
---------AVEIVRKGGVIVYPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDLSELS-TYSFVDNVAFRLMKNNTPGNYTFILKGTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEIKDRLEKQVDLIIHGGYLGQK-PTTVIDLTDDTPVVVR
General information:
TITO was launched using:
RESULT:
Template:
1K7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98692 for 1333 contacts (-74.0/contact) +
2D Compatibility (PS) -18139 + (NN) -10587 + (LL) 960
1D Compatibility (HY) -11600 + (ID) 2000
Total energy: -140058.0 ( -105.07 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1K7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K7J-query.scw
PDB file :
Tito_Scwrl_1K7J.pdb
: