Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLPTCLLAATLFLGSASLYAEDPACARVRLADPGW-SDIAVTNATAAFLLESLGYQVKIDTLSVPIIYGGLRDGQVDAFLGGWMP-AHQDYHDKFVASGQVERLGRNLDGTRFTLAVPRYVWDAGVHRFEDLAAQGQRFNRKLYGIGSGAPANQSIQKMIDANQFGLGDWKLVESSEQAMLAELGRAEKRQRWLVFLGWTPHPMNIRHDLRYLEGGEQYFGDRGQVYTLARKGYAAQCPNPARLLANLRFDL-DMENRLMSDALEGTATPASATRAWLKANPRVLEAWLQGVTSRDGGDALAAVRGQP |
| 3L6G Chain:A ((3-255)) | ----------------------------KVDLVYMNWDSEVASINVLTQAMKEH-GFDVKTTALDNAVAWQTVANGQADGMVSAWLPNTHKTQWQKYGKS--VDLLGPNLKGAKVGFVVPSYM---NVNSIEDLTNQA---NKTITGIEPGAGVMAASEKTLNSYD-NLKDWKLVPSSSGAMTVALGEAIKQHKDIVITGWSPHWMFNKYDLKYLADPKGTMGTSENINTIVRKGLKKENPEAYKVLDKFNWTTKDMEAVMLD--IQNGKTPEEAAKNWIKDHQKEVDKWFKGS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L6G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130663 for 2073 contacts (-63.0/contact) +
2D Compatibility (PS) -26641 + (NN) -6659 + (LL) 3676
1D Compatibility (HY) -16000 + (ID) 4000
Total energy: -180287.0 ( -86.97 by residue)
QMean score : 0.536
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