Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPER----MGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAPE-----PLVRDDLA-AGRLAAPWGFIETDARLALWVPARLHDPRAGRLAQWLREQLAG |
| 2QSX Chain:A ((19-215)) | ---------------------------------------------------------------------------------------------ELLVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGDGAV-------ESDLHVRCLPLSTHYEYSQLLCEETLLLIGNTNLP-------ISHYP--------FIPQTTRPQLWEQFKQEN-----ITYHSVGFEHFYLACEAVRMEKGLALLPDFMAQFSILRGDIQHIGNLKLHSGY----GYYVVIPNFRLTSRKVALFHDWLKDKLT- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122105 for 1212 contacts (-100.7/contact) +
2D Compatibility (PS) -17957 + (NN) -5550 + (LL) 8592
1D Compatibility (HY) -12800 + (ID) 2000
Total energy: -151820.0 ( -125.26 by residue)
QMean score : 0.461
|
|
|