Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDNPFATPTAPVQPPAREVPATTQPYAFIAVLALVTCLSFAVSLGIQWYNDIGEIRQRFSEHLQLMAPHWFTGLVFYAAANLLVLHAYREKRQLVEFRPLALLLIGYGLLNLVCGMLAGIGLAPLTLPFYQWVTAQSSYGVWLMAFNEAMSWVYLLLGSLLPLGLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFLPYALLRYDEPWLYGLYLSGVALPAALLFGAVCTRLPARLQRFAAGRALLLAVVAMLLWSVALLAVGGGLALLMILGLAPAGIGYTLLVALLGVGLLALLWPIGRLATRWCYADQLAA |
| 2FYU Chain:K ((11-45)) | ----------------------------------------------------------------RQLARNWVPTASLWGAVGAVGLVWATDWRLILDWVPYINGKFK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7777 for 148 contacts (-52.5/contact) +
2D Compatibility (PS) -3524 + (NN) -2616 + (LL) 24480
1D Compatibility (HY) -1600 + (ID) 250
Total energy: 8713.0 ( 58.87 by residue)
QMean score : 0.119
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