Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEPDLARLEHFIG--PPLLQCFMQTYGFDEARAWEAVNHYRERFRVTGLY--EN-----RVFDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHF-KAIYGSELDGTRTHKEELIRHLLDSEGLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
2HSZ Chain:A ((26-243))
----------IGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPF-YYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKITQ--
General information:
TITO was launched using:
RESULT:
Template:
2HSZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135725 for 1742 contacts (-77.9/contact) +
2D Compatibility (PS) -22403 + (NN) -7132 + (LL) 888
1D Compatibility (HY) -14400 + (ID) 2750
Total energy: -181522.0 ( -104.20 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_2HSZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HSZ-query.scw
PDB file :
Tito_Scwrl_2HSZ.pdb
: