Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQPSENRLITSARYALCLLTASGVLLSGCASSGVGSVAQTTRAEYYPSCYEPVSHLRSTDNAVRNSAITGAITGGLLGGLAGGLASDENRGRNAALAAAGGALAGGAAGYYMEKQKQISDDRARIGSYGTDVDRSTVEINRSVAYAKSAQSCYQSQFKALLDGRKNKSINEAEGRKRLAEIVSGLQETNALLVAANGRAGENI-SNYTQAYEKDLQQVGVPRAEVTKVAEAENRASTTKGGSKPKTGSNPKVPKEAVATEQTIRKAQDAQSEGNKVASQGQGMIREVCNSPDMGDWAPPSCAKA |
3LDT Chain:A ((17-116)) | ---------------------------------------------------------------------------------------------------------GLVASIYRDSKRKIIRD----------LQKQDIQYVEYGDTRTLII-PTDKYFM-SSPR------LNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSR--KRKLSQAQAETMMTFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEIQWFTSEG------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20502 for 547 contacts (37.5/contact) +
2D Compatibility (PS) -10067 + (NN) -251 + (LL) 7428
1D Compatibility (HY) -800 + (ID) 450
Total energy: 16362.0 ( 29.91 by residue)
QMean score : -0.006
|
|
|