Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVPNSVSYYRSASYSHVGMVRKVNEDASLDAPEAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLRGVSVMGSTLVLLAA-RGNQASCLWA--GDSRLYRLRGGVLEAISRDHSYVQELLDNALISEEEARHHPRANVVTRAVGVHEQLELSEAALHVLPGDSFLLCSDGLNKTADDSELRDVLSHSDPYAVVRSLVHLGLTRGAPDNITALVVRAF |
2JFS Chain:A ((4-231)) | ------SVLSAATATDQGPVRENNQDACL--ADGILYAVADGFG--ARGHHASATALKTLSAGFAAA--PDRDGLLEA-VQQANLRVFELLGDE-PTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136349 for 1952 contacts (-69.9/contact) +
2D Compatibility (PS) -23075 + (NN) -2231 + (LL) 88
1D Compatibility (HY) -6000 + (ID) 4150
Total energy: -171717.0 ( -87.97 by residue)
QMean score : 0.451
|
|
|