Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRV-GRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
| 1JB0 Chain:E ((20-39)) | ------------------------------------------------------------------------VGTV-ASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEVA-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3609 for 70 contacts (-51.6/contact) +
2D Compatibility (PS) -1912 + (NN) -175 + (LL) 10484
1D Compatibility (HY) -800 + (ID) 350
Total energy: 3638.0 ( 51.97 by residue)
QMean score : 0.089
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