Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKI---------------GSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKEA |
| 3LML Chain:A ((300-454)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPRLANDEAEEALQNGEFVLTFDARDKAVYVEQDLNSLTTF--SKEKSS-------KFRK-NKISRILDGINNDTRRNILDAIKERKDANTDIPADENGVQFILSMQTAYLNELQDSGA------ITNFDST--ADITVSLNN-NVDGFIVNQSIEPVDSGEKFYFTTEVKLEH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3398 for 872 contacts (3.9/contact) +
2D Compatibility (PS) -15096 + (NN) -8778 + (LL) 23476
1D Compatibility (HY) 6400 + (ID) 550
Total energy: 8850.0 ( 10.15 by residue)
QMean score : 0.198
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