Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEIPDAWQDQSINIFKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
4QK0 Chain:A ((170-221))
--------------------------------------------------YADYIGTVFGRGEGQIPGYDGHQEIEL------ALLKLYEVTGNENYLKLSQYFIDQRGQQPYYFDQEKEARGETEPFWYDGGYRYHQAHIPVR
General information:
TITO was launched using:
RESULT:
Template:
4QK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7123 for 318 contacts (-22.4/contact) +
2D Compatibility (PS) -5566 + (NN) -3083 + (LL) 3252
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -18970.0 ( -59.65 by residue)
QMean score : 0.119
(partial model without unconserved sides chains):
PDB file :
Tito_4QK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QK0-query.scw
PDB file :
Tito_Scwrl_4QK0.pdb
: