Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTE-WDCGTWCVAGEDDDMLP-WEIVSATVVHEPVEQALFLGARGQVFCMG-SGDIHEEQLPDGDDAIGGRGNMRGVACIDGVAYACGMDRQVYRRFD-ENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDGEIWQYD--GKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLLRGRN--D-HWEIIAQDDVDEDLWSLAWF-DGALYVSSATA-V-YTL-V-GGHLKEVDFGDEQ-PQRCFHLS-AADGVLWSIAA-KDIFS-FD-GQQWTRID |
| 2XBG Chain:A ((38-305)) | ----------------------------------------AIPALDYNPWEAI----QLPTTATILDMSFI--DRHHGWLVGVNATLMETRDGGQTWEP-RTLV-L-DHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLP------GSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRT-TSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQQDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138006 for 1869 contacts (-73.8/contact) +
2D Compatibility (PS) -26780 + (NN) -9210 + (LL) 3712
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -179684.0 ( -96.14 by residue)
QMean score : 0.347
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