Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYP-QLGVIASYGTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHAVSAEAFFQAAQKRRLRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGNGRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSD-VGGGTSLSLLANLADAYKIQQL---RGTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG
4DYK Chain:A ((56-380))----------------------------------------------------------------------------------IRELPGMLLAPGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITC---FSDMY-FYPQAICGVVHDSGVRAQVAIPVLDFPIPGA--RDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEEL-DASIQMHVHETAFEVEQAMER--NGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVYDPVSQLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQ


General information:
TITO was launched using:
RESULT:

Template: 4DYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -165705 for 2810 contacts (-59.0/contact) +
2D Compatibility (PS) -36060 + (NN) -27317 + (LL) 4676
1D Compatibility (HY) -15200 + (ID) 4750
Total energy: -244356.0 ( -86.96 by residue)
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_4DYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DYK-query.scw
PDB file : Tito_Scwrl_4DYK.pdb: